Len_g38488


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g38488

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00155170 CRR2,... Pentatricopeptide repeat-containing protein At3g46790,... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00228270 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00088p00046850 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
AMTR_s00092p00078040 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.02 OrthoFinder output from all 47 species
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G27110 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g38429 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g11079 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19539 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30012 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G062000.1 Ceric.10G062000 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g28401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_08772 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
LOC_Os01g41650.1 LOC_Os01g41650 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
LOC_Os01g45840.1 LOC_Os01g45840 Pentatricopeptide repeat-containing protein At2g36730... 0.05 OrthoFinder output from all 47 species
LOC_Os02g18810.1 LOC_Os02g18810 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os03g64370.1 LOC_Os03g64370 Pentatricopeptide repeat-containing protein At5g52850,... 0.03 OrthoFinder output from all 47 species
LOC_Os04g02850.1 OTP84, LOC_Os04g02850 RNA editing factor (OTP84) 0.03 OrthoFinder output from all 47 species
LOC_Os08g13990.1 LOC_Os08g13990 Pentatricopeptide repeat-containing protein At2g37320... 0.05 OrthoFinder output from all 47 species
LOC_Os12g30620.1 LOC_Os12g30620 Pentatricopeptide repeat-containing protein At3g29230... 0.05 OrthoFinder output from all 47 species
Len_g03710 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g03784 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04137 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g56481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15182 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g26678 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g26925 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g26265 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28136 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38544 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38653 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g42976 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g15871 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g29809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005914 No alias not classified & original description: CDS=1-2298 0.05 OrthoFinder output from all 47 species
Smo100216 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Smo11063 REME1 Pentatricopeptide repeat-containing protein At2g34400... 0.04 OrthoFinder output from all 47 species
Spa_g25363 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g26548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23886 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g26628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43886 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023289_P001 Zm00001e023289 Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 102 120
IPR002885 Pentatricopeptide_repeat 124 171
No external refs found!