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  5. Len_g38605

Len_g38605 (FLA10)


Aliases : FLA10

Description : Fasciclin-type arabinogalactan protein & original description: none


Gene families : OG0000786 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000786_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g38605
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00195530 SOS5,... External stimuli response.salinity.SOS (Salt Overly... 0.02 OrthoFinder output from all 47 species
AT2G24450 FLA3 FASCICLIN-like arabinogalactan protein 3 precursor 0.03 OrthoFinder output from all 47 species
AT5G55730 FLA1 FASCICLIN-like arabinogalactan 1 0.03 OrthoFinder output from all 47 species
Als_g08047 FLA10 Fasciclin-type arabinogalactan protein & original... 0.03 OrthoFinder output from all 47 species
Aob_g19882 SOS5 Fasciclin-type arabinogalactan protein & original... 0.04 OrthoFinder output from all 47 species
Dac_g01579 FLA10 Fasciclin-type arabinogalactan protein & original... 0.03 OrthoFinder output from all 47 species
Dac_g15785 FLA10 Fasciclin-type arabinogalactan protein & original... 0.03 OrthoFinder output from all 47 species
Ehy_g17302 SOS5 Fasciclin-type arabinogalactan protein & original... 0.03 OrthoFinder output from all 47 species
LOC_Os03g03600.1 FLA10, LOC_Os03g03600 fasciclin-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os06g44660.1 FLA14, LOC_Os06g44660 fasciclin-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Lfl_g21823 AGP8, FLA8 regulatory protein *(DEAP1) of exine formation &... 0.03 OrthoFinder output from all 47 species
MA_178651g0010 SOS5 fasciclin-type arabinogalactan protein. regulatory... 0.03 OrthoFinder output from all 47 species
Pir_g29285 FLA1 Fasciclin-type arabinogalactan protein & original... 0.03 OrthoFinder output from all 47 species
Solyc06g076120.2.1 SOS5, Solyc06g076120 Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e000209_P003 FLA10, Zm00001e000209 fasciclin-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Zm00001e019325_P001 SOS5, Zm00001e019325 fasciclin-type arabinogalactan protein. regulatory... 0.02 OrthoFinder output from all 47 species
Zm00001e031831_P001 SOS5, Zm00001e031831 fasciclin-type arabinogalactan protein. regulatory... 0.02 OrthoFinder output from all 47 species
Zm00001e036843_P001 FLA2, Zm00001e036843 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR000782 FAS1_domain 192 326
IPR000782 FAS1_domain 32 153
No external refs found!