Len_g39780 (RPS11)

Aliases : RPS11

Description : component *(uS11m) of small mitoribosomal-subunit proteome & original description: none

Gene families : OG0004584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004584_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g39780
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
ATCG00750	RPS11	ribosomal protein S11	0.06	OrthoFinder output from all 47 species
Aev_g01915	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Aev_g37240	RPS11	component *(uS11c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Ala_g07144	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Als_g62775	RPS11	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g18582	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Azfi_s0027.g023689	No alias	not classified & original description: CDS=1-321	0.03	OrthoFinder output from all 47 species
Cba_g15340	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Dcu_g39431	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Dde_g49431	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Gb_08606	NFD3	component mtRPS11 of small ribosomal subunit proteome	0.05	OrthoFinder output from all 47 species
LOC_Os04g16838.1	RPS11, LOC_Os04g16838	component psRPS11 of small ribosomal subunit proteome	0.07	OrthoFinder output from all 47 species
LOC_Os10g21332.1	RPS11, LOC_Os10g21332	component psRPS11 of small ribosomal subunit proteome	0.07	OrthoFinder output from all 47 species
Nbi_g20255	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.12	OrthoFinder output from all 47 species
Pir_g07424	RPS11	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Pp3c14_21450V3.1	Pp3c14_21450	ribosomal protein S11	0.01	OrthoFinder output from all 47 species
Spa_g02162	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Tin_g21094	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0009055	electron transfer activity	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0048038	quinone binding	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001892	Ribosomal_S13	2	28
IPR001971	Ribosomal_S11	107	218

External Links

No external refs found!

Len_g39780 (RPS11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation