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  5. Len_g40903

Len_g40903


Description : transcription factor *(CLAUSA) & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g40903

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00224230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT5G45580 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g03847 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17220 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g09581 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04205 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene19889.t1 Aspi01Gene19889 transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G030100.1 Ceric.07G030100 transcription factor *(CLAUSA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G027900.1 Ceric.21G027900 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.21G076700.1 Ceric.21G076700 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G006800.1 Ceric.33G006800 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g27691 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g15012 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26187 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g39292 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g22986 KAN4, ATS KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31337 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01020827001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01028403001 PHR1, AtPHR1 Nutrient uptake.phosphorus assimilation.phosphate... 0.03 OrthoFinder output from all 47 species
GSVIVT01033515001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_25992 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Gb_26822 PHL1 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g07170.1 LOC_Os02g07170 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os03g03760.1 LOC_Os03g03760 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os03g20900.1 LOC_Os03g20900 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os04g51130.1 LOC_Os04g51130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g35140.1 LOC_Os06g35140 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os06g45890.1 LOC_Os06g45890 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
MA_636769g0010 PHL1 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g25706 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05367 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15270 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08186 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13922 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28596 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc02g076670.3.1 Solyc02g076670 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Solyc04g079600.3.1 KAN4, ATS, Solyc04g079600 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e004125_P001 Zm00001e004125 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e022454_P001 Zm00001e022454 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e030364_P002 Zm00001e030364 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e037761_P001 Zm00001e037761 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 35 85
No external refs found!