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  5. Len_g44137

Len_g44137 (OPT4, ATOPT4)


Aliases : OPT4, ATOPT4

Description : oligopeptide transporter *(OPT) & original description: none


Gene families : OG0000539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000539_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g44137
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AT4G27730 OPT6, ATOPT6 oligopeptide transporter 1 0.03 OrthoFinder output from all 47 species
AT5G55930 OPT1, ATOPT1 oligopeptide transporter 1 0.02 OrthoFinder output from all 47 species
Aspi01Gene20038.t1 OPT4, ATOPT4,... oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25768 OPT4, ATOPT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G084900.1 OPT4, ATOPT4,... oligopeptide transporter *(OPT) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z045000.1 OPT3, ATOPT3,... oligopeptide transporter *(OPT) & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01019633001 OPT7, ATOPT7 Solute transport.carrier-mediated transport.OPT... 0.04 OrthoFinder output from all 47 species
LOC_Os08g23130.3 OPT1, ATOPT1,... oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
Ore_g32248 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g082700.4.1 OPT7, ATOPT7,... oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
Zm00001e003423_P001 OPT5, ATOPT5,... oligopeptide transporter (OPT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 83 575
No external refs found!