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  5. Len_g44821

Len_g44821 (ATGSR1, GLN1;1,...)


Aliases : ATGSR1, GLN1;1, ATGLN1;1, GSR 1

Description : EC_6.3 ligase forming carbon-nitrogen bond & original description: none


Gene families : OG0000646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000646_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g44821
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00120730 GS2, ATGSL1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.03 OrthoFinder output from all 47 species
AMTR_s00060p00109730 ATGSR1, GLN1;1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.03 OrthoFinder output from all 47 species
AT5G37600 ATGSR1, GLN1;1,... glutamine synthase clone R1 0.03 OrthoFinder output from all 47 species
Adi_g103788 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.20G000200.1 GLN1;4, Ceric.20G000200 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.21G070700.1 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.05 OrthoFinder output from all 47 species
Ceric.39G059200.1 GLN1;4, Ceric.39G059200 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Dac_g05038 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Dac_g37528 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01008483001 ATGSR1, GLN1;1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.02 OrthoFinder output from all 47 species
LOC_Os03g50490.1 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.03 OrthoFinder output from all 47 species
Len_g05760 GLN1;4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11416 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Lfl_g25441 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Lfl_g26898 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Mp1g03980.1 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.03 OrthoFinder output from all 47 species
Mp6g15560.1 GLN1;4 Glutamine synthetase cytosolic isozyme 1-1 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Msp_g33326 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.05 OrthoFinder output from all 47 species
Nbi_g31910 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Pir_g34282 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Ppi_g05089 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023030 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Smo270944 ATGSR1, GLN1;1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.04 OrthoFinder output from all 47 species
Smo82032 ATGSR1, GLN1;1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.02 OrthoFinder output from all 47 species
Solyc04g014510.3.1 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.03 OrthoFinder output from all 47 species
Spa_g39139 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Zm00001e000880_P002 ATGSR1, GLN1;1,... Glutamine synthetase root isozyme 1 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Zm00001e015749_P003 ATGSR1, GLN1;1,... cytosolic glutamine synthetase (GLN1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEA Interproscan
BP GO:0006807 nitrogen compound metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR008147 Gln_synt_N 30 95
IPR008146 Gln_synth_cat_dom 108 345
No external refs found!