1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g46121

Len_g46121 (SVB)


Aliases : SVB

Description : regulatory mediator of IRE1-bZIP60 UPR pathway & original description: none


Gene families : OG0000429 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g46121

Target Alias Description ECC score Gene Family Method Actions
Gb_01250 SVB no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g02850.1 LOC_Os07g02850 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g02880.1 LOC_Os07g02880 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g02900.1 LOC_Os07g02900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g02920.1 LOC_Os07g02920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g38210.1 LOC_Os11g38210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g38240.1 SVB, LOC_Os11g38240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g25678 SVB regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.03 OrthoFinder output from all 47 species
Ppi_g18006 SVB regulatory mediator of IRE1-bZIP60 UPR pathway &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007493 DUF538 46 153
No external refs found!