Len_g46528 (ABF1)


Aliases : ABF1

Description : not classified & original description: none


Gene families : OG0000314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g46528

Target Alias Description ECC score Gene Family Method Actions
AT1G45249 ABF2, ATAREB1, AREB1 abscisic acid responsive elements-binding factor 2 0.03 OrthoFinder output from all 47 species
AT1G49720 ABF1 abscisic acid responsive element-binding factor 1 0.02 OrthoFinder output from all 47 species
AT3G19290 AREB2, ABF4 ABRE binding factor 4 0.03 OrthoFinder output from all 47 species
AT4G34000 DPBF5, ABF3 abscisic acid responsive elements-binding factor 3 0.04 OrthoFinder output from all 47 species
Ala_g02280 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02694 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g02975 DPBF3, AREB3 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009485001 ABF2, ATAREB1, AREB1 RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
GSVIVT01014739001 ABF2, ATAREB1, AREB1 RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
GSVIVT01031730001 No alias RNA biosynthesis.transcriptional activation.bZIP... 0.02 OrthoFinder output from all 47 species
GSVIVT01036137001 DPBF2, AtbZIP67 RNA biosynthesis.transcriptional activation.bZIP... 0.02 OrthoFinder output from all 47 species
LOC_Os01g64730.1 GBF4, LOC_Os01g64730 transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os02g52780.1 ABF2, ATAREB1,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Mp2g22820.1 ABF2, ATAREB1, AREB1 transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Pir_g43939 DPBF3, AREB3 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo67189 DPBF2, AtbZIP67 RNA biosynthesis.transcriptional activation.bZIP... 0.02 OrthoFinder output from all 47 species
Solyc01g104650.3.1 GBF4, Solyc01g104650 transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Solyc04g078840.3.1 ABF2, ATAREB1,... transcription factor (bZIP) 0.04 OrthoFinder output from all 47 species
Zm00001e003794_P001 ABF2, ATAREB1,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e019163_P004 GBF4, Zm00001e019163 transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
Zm00001e022136_P001 ABF2, ATAREB1,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!