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  5. Len_g47509

Len_g47509 (ATACA10, CIF1, ACA10)


Aliases : ATACA10, CIF1, ACA10

Description : not classified & original description: none


Gene families : OG0000086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g47509
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Als_g50778 ACA8, AT-ACA8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59089 ACA8, AT-ACA8 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Aop_g60490 ATACA10, CIF1, ACA10 P2B-type calcium cation-transporting ATPase *(ACA) &... 0.03 OrthoFinder output from all 47 species
Dac_g35603 ACA8, AT-ACA8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g33632 ACA8, AT-ACA8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012708_P001 ACA9, ATACA9,... Calcium-transporting ATPase 5, plasma membrane-type... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR006068 ATPase_P-typ_cation-transptr_C 3 117
No external refs found!