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  5. Len_g47978

Len_g47978 (CB5-E, ATCB5-E, ATB5-A, B5 #2)


Aliases : CB5-E, ATCB5-E, ATB5-A, B5 #2

Description : electron shuttle component *(Cyt-b5) of CER1-CER3 alkane-forming complex & original description: none


Gene families : OG0000285 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000285_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g47978

Target Alias Description ECC score Gene Family Method Actions
Ehy_g03081 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.01 OrthoFinder output from all 47 species
Ehy_g27857 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
GSVIVT01009376001 B5 #3, CB5-D,... Cell wall.cutin and suberin.cuticular lipid... 0.03 OrthoFinder output from all 47 species
Gb_08648 CB5-A, B5 #6, ATCB5-A component Cyt-b5 of CER1-CER3 alkane-forming complex 0.01 OrthoFinder output from all 47 species
Len_g47979 CB5-E, ATCB5-E,... electron shuttle component *(Cyt-b5) of CER1-CER3... 0.06 OrthoFinder output from all 47 species
MA_20157g0010 B5 #3, CB5-D,... component Cyt-b5 of CER1-CER3 alkane-forming complex 0.01 OrthoFinder output from all 47 species
MA_21175g0010 B5 #4, ATCB5-B, CB5-B component Cyt-b5 of CER1-CER3 alkane-forming complex 0.01 OrthoFinder output from all 47 species
Ore_g19874 B5 #3, CB5-D,... electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Pnu_g05033 B5 #4, ATCB5-B, CB5-B electron shuttle component *(Cyt-b5) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Sam_g35067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g098320.3.1 CB5-E, ATCB5-E,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001199 Cyt_B5-like_heme/steroid-bd 7 77
No external refs found!