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  5. Len_g48729

Len_g48729


Description : metabolite transporter *(DTX) & original description: none


Gene families : OG0000115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g48729

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00178100 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
AT1G12950 RSH2 root hair specific 2 0.05 OrthoFinder output from all 47 species
AT2G04090 No alias MATE efflux family protein 0.05 OrthoFinder output from all 47 species
Ala_g16023 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36385.t1 Aspi01Gene36385 metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
Cre10.g445850 No alias Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
Cre12.g523250 No alias Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder output from all 47 species
GSVIVT01009629001 No alias Solute transport.carrier-mediated transport.MOP... 0.05 OrthoFinder output from all 47 species
GSVIVT01011800001 No alias Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
GSVIVT01012741001 No alias Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
GSVIVT01020808001 TT12, ATTT12 Solute transport.carrier-mediated transport.MOP... 0.04 OrthoFinder output from all 47 species
GSVIVT01029139001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_00281 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Gb_40010 No alias metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
LOC_Os03g42830.1 LOC_Os03g42830 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
LOC_Os08g43654.1 LOC_Os08g43654 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Len_g29998 No alias metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10431371g0010 No alias metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
MA_253593g0010 No alias metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
MA_45692g0010 TT12, ATTT12 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Ppi_g06909 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Smo233004 No alias Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
Solyc01g109310.3.1 Solyc01g109310 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Solyc02g080480.3.1 Solyc02g080480 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Solyc02g091050.3.1 Solyc02g091050 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Solyc02g091080.2.1 TX1, ATDTX1,... metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Solyc03g112260.2.1 Solyc03g112260 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Solyc05g013450.4.1 RSH2, Solyc05g013450 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Tin_g30925 No alias metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004788_P001 Zm00001e004788 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e005085_P001 Zm00001e005085 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e012501_P002 Zm00001e012501 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Zm00001e012504_P001 Zm00001e012504 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e022499_P002 Zm00001e022499 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e035104_P001 Zm00001e035104 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0033897 ribonuclease T2 activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 2 64
No external refs found!