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  5. Len_g49274

Len_g49274


Description : co-chaperone *(Hsp40) & original description: none


Gene families : OG0000947 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000947_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g49274

Target Alias Description ECC score Gene Family Method Actions
AT4G39960 No alias Molecular chaperone Hsp40/DnaJ family protein 0.02 OrthoFinder output from all 47 species
Adi_g054489 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01848 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06509 No alias co-chaperone *(Hsp40) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g08274 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13916 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26939 No alias co-chaperone *(Hsp40) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g03171 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25562 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021350.15 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.02 OrthoFinder output from all 47 species
Cre12.g507650 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.02 OrthoFinder output from all 47 species
Dcu_g10357 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13242 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g56040.1 LOC_Os02g56040 co-chaperone (Hsp40) 0.03 OrthoFinder output from all 47 species
Mp8g17710.1 No alias co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
Msp_g02807 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09958 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13465 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13555 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08527 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11527 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14679 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014072 No alias co-chaperone *(Hsp40) & original description: CDS=133-1413 0.04 OrthoFinder output from all 47 species
Sam_g17684 No alias co-chaperone *(Hsp40) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g23499 No alias co-chaperone *(Hsp40) & original description: none 0.03 OrthoFinder output from all 47 species
Smo430412 No alias Chaperone protein dnaJ A7A, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Spa_g08504 No alias co-chaperone *(Hsp40) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10094 No alias co-chaperone *(Hsp40) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e016156_P001 Zm00001e016156 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR002939 DnaJ_C 203 419
IPR001305 HSP_DnaJ_Cys-rich_dom 229 292
IPR001623 DnaJ_domain 86 147
No external refs found!