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  5. Len_g49790

Len_g49790


Description : not classified & original description: none


Gene families : OG0001021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g49790
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Aop_g64780 NTMC2TYPE1.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g51107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g65105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33429 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41092 SYT5, NTMC2T2.1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g43078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44347 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g31792 SYT5, NTMC2T2.1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g33485 NTMC2T1.3, SYT3,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g37182 SYT5, NTMC2T2.1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37909 SYT5, NTMC2T2.1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g34305 SYT5, NTMC2T2.1,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g35208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 1 70
No external refs found!