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  5. Len_g50873

Len_g50873 (SPL2)


Aliases : SPL2

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g50873
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00235390 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00217130 SPL2,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
AMTR_s00047p00197010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.05 OrthoFinder output from all 47 species
AMTR_s00106p00142470 SPL11,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00144050 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
AT5G18830 SPL7, ATSPL7 squamosa promoter binding protein-like 7 0.03 OrthoFinder output from all 47 species
Aev_g38965 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38966 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14890 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20948 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47037 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26291.t1 SPL3, Aspi01Gene26291 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001662 SPL7, ATSPL7 SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g13783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26615 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32859 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34343 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G025600.1 SPL3, Ceric.25G025600 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01012247001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
Gb_22010 SPL8 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
MA_10429891g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g11850.1 SPL7, ATSPL7 transcription factor (SBP). copper homeostasis regulator (SPL7) 0.02 OrthoFinder output from all 47 species
Msp_g12140 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15680 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22224 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016307 SPL8 SBP-type transcription factor & original description: CDS=1-714 0.04 OrthoFinder output from all 47 species
Sam_g14898 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32347 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010067_P001 AtSPL9, SPL9,... transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Zm00001e010443_P001 SPL5, Zm00001e010443 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e025234_P001 SPL2, Zm00001e025234 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e041526_P001 SPL3, Zm00001e041526 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 270 343
No external refs found!