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  5. Len_g51208

Len_g51208 (ZFP6)


Aliases : ZFP6

Description : C2H2 subclass ZFP transcription factor & original description: none


Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g51208

Target Alias Description ECC score Gene Family Method Actions
Adi_g024673 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Adi_g032518 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g033743 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aev_g04158 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g22522 KNU C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g21302 ZFP7 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene23411.t1 ZFP3, Aspi01Gene23411 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025408 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.23G038400.1 Ceric.23G038400 C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01028555001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
GSVIVT01035905001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
LOC_Os01g04120.1 LOC_Os01g04120 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os12g42250.1 LOC_Os12g42250 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_110160g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_2800g0010 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Mp1g25140.1 ZFP11, ATZFP11 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g06363 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g00812 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g20538 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ppi_g59122 ZFP5 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g03417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05801 GIS C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g52372 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e012453_P001 ZFP1, ATZFP1,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e020926_P001 Zm00001e020926 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e032639_P001 ZFP10, ATZFP10,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!