Aliases : ATTRX1, ATTRX H1, TRX1
Description : H-type thioredoxin *(Trx-H) & original description: none
Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Len_g53408 | |
| Cluster | HCCA: Cluster_87 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g028432 | ATTRX4, ATH4 | H-type thioredoxin *(Trx-H) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g43053 | ATHM4, TRX-M4, ATM4 | H-type thioredoxin *(Trx-H) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g44532 | ATTRX4, ATH4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g52277 | TRXH2, TRX2,... | H-type thioredoxin *(Trx-H) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g45022 | TRXH2, TRX2,... | H-type thioredoxin *(Trx-H) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g51611 | TRXH2, TRX2,... | H-type thioredoxin *(Trx-H) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g52068 | TRXH2, TRX2,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g53147 | ATH5, ATTRX5, TRX5, LIV1 | H-type thioredoxin *(Trx-H) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g24718 | TRXH2, TRX2,... | H-type thioredoxin *(Trx-H) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g31682 | ATH5, ATTRX5, TRX5, LIV1 | H-type thioredoxin *(Trx-H) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | HCCA |
| MF | GO:0004096 | catalase activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | HCCA |
| MF | GO:0004612 | phosphoenolpyruvate carboxykinase (ATP) activity | IEP | HCCA |
| CC | GO:0005730 | nucleolus | IEP | HCCA |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
| BP | GO:0006006 | glucose metabolic process | IEP | HCCA |
| BP | GO:0006094 | gluconeogenesis | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
| BP | GO:0019319 | hexose biosynthetic process | IEP | HCCA |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | HCCA |
| CC | GO:0030684 | preribosome | IEP | HCCA |
| CC | GO:0030686 | 90S preribosome | IEP | HCCA |
| CC | GO:0030688 | preribosome, small subunit precursor | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0046364 | monosaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013766 | Thioredoxin_domain | 16 | 112 |
| No external refs found! |
