Aliases : OTP84
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G39620 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G53360 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g014776 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05074 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g05112 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g19351 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g33022 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g16282 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06434 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17301 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04416 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_33439 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g01115.1 | LOC_Os01g01115 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g49740.1 | EMB2744, LOC_Os05g49740 | Pentatricopeptide repeat-containing protein At5g39680... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g34870.1 | LOC_Os09g34870 | Pentatricopeptide repeat-containing protein At2g36980,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g08140.1 | LOC_Os12g08140 | Pentatricopeptide repeat-containing protein At2g33760... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17972 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g33724 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g18215 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g18730 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g02370 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g34877 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63739 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g02795 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g15319 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g15726 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23075 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23084 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23094 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23593 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g23611 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30634 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g02982 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0080.g017880 | No alias | not classified & original description: CDS=1-1959 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g17751 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24227 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37954 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g114010.3.1 | Solyc03g114010 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g008890.3.1 | Solyc07g008890 | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g009220.2.1 | Solyc07g009220 | Pentatricopeptide repeat-containing protein At2g34400... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 481 | 528 |
| IPR002885 | Pentatricopeptide_repeat | 380 | 426 |
| IPR002885 | Pentatricopeptide_repeat | 76 | 119 |
| IPR002885 | Pentatricopeptide_repeat | 176 | 222 |
| IPR002885 | Pentatricopeptide_repeat | 281 | 324 |
| IPR002885 | Pentatricopeptide_repeat | 456 | 479 |
| IPR002885 | Pentatricopeptide_repeat | 150 | 175 |
| No external refs found! |
