Len_g54667 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g54667

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00242080 CRR28,... Pentatricopeptide repeat-containing protein At1g59720,... 0.02 OrthoFinder output from all 47 species
AMTR_s00081p00019740 CRR22,... Pentatricopeptide repeat-containing protein At5g27110... 0.02 OrthoFinder output from all 47 species
Adi_g005243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007782 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100764 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107292 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11484 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12767 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30728 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene14860.t1 Aspi01Gene14860 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26329.t1 Aspi01Gene26329 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28051.t2 OSB3, Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene30154.t1 Aspi01Gene30154 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41775.t1 Aspi01Gene41775 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0134.g049386 No alias not classified & original description: CDS=1-2409 0.03 OrthoFinder output from all 47 species
Cba_g06947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g23772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34546 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G024400.1 Ceric.07G024400 not classified & original description: pacid=50626298... 0.03 OrthoFinder output from all 47 species
Ceric.12G016200.1 Ceric.12G016200 not classified & original description: pacid=50601153... 0.02 OrthoFinder output from all 47 species
Ceric.15G015100.1 CRR22, Ceric.15G015100 not classified & original description: pacid=50640379... 0.03 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
Dac_g18747 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g33215 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06754 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17755 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_187514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Msp_g04514 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24078 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42980 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43134 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27843 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38771 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g39701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22972 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13499 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03152 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12889 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03894 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06451 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18927 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006451 No alias not classified & original description: CDS=1-639 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008505 CRR22 not classified & original description: CDS=1-1692 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018363 No alias not classified & original description: CDS=1-1818 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0134.g022300 CRR22 not classified & original description: CDS=1-1791 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022493 No alias not classified & original description: CDS=1-2544 0.03 OrthoFinder output from all 47 species
Sam_g13748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Solyc02g065410.3.1 CRR22, Solyc02g065410 Pentatricopeptide repeat-containing protein At1g20230... 0.02 OrthoFinder output from all 47 species
Solyc04g005460.1.1 OTP82, Solyc04g005460 Pentatricopeptide repeat-containing protein At2g20540... 0.02 OrthoFinder output from all 47 species
Spa_g23949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008200_P001 Zm00001e008200 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Zm00001e039026_P001 OTP82, Zm00001e039026 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Zm00001e041987_P001 Zm00001e041987 Pentatricopeptide repeat-containing protein At2g37320... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 152 174
IPR002885 Pentatricopeptide_repeat 177 224
IPR002885 Pentatricopeptide_repeat 76 122
IPR002885 Pentatricopeptide_repeat 281 327
No external refs found!