Aliases : OTP84
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00153950 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00063p00172440 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g014239 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g069246 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g113573 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g26222 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g28137 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g06199 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07500 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26222 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000887 | No alias | not classified & original description: CDS=1-1611 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g008963 | No alias | not classified & original description: CDS=1-2157 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.39G045800.1 | VAC1, ECB2,... | not classified & original description: pacid=50583112... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g35086 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06413 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Gb_15183 | No alias | Pentatricopeptide repeat-containing protein At2g39620... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g56400.1 | LOC_Os03g56400 | Pentatricopeptide repeat-containing protein At2g22070... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g09530.1 | LOC_Os04g09530 | RNA editing factor (BLX) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06446 | EMB2261 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07755 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g15268 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_480955g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_79624g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g11260 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g17377 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g18050 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g25697 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g40748 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g25357 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30911 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g33905 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13245 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07011 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53945 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g54934 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08388 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16371 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16549 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo408124 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g051480.1.1 | OTP84, Solyc04g051480 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g43995 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011875_P001 | OTP85, Zm00001e011875 | RNA editing factor (OTP85) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029119_P001 | Zm00001e029119 | Pentatricopeptide repeat-containing protein At2g33760... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 98 | 122 |
| IPR002885 | Pentatricopeptide_repeat | 302 | 324 |
| IPR002885 | Pentatricopeptide_repeat | 607 | 631 |
| IPR002885 | Pentatricopeptide_repeat | 328 | 374 |
| IPR002885 | Pentatricopeptide_repeat | 532 | 579 |
| IPR002885 | Pentatricopeptide_repeat | 429 | 476 |
| IPR002885 | Pentatricopeptide_repeat | 22 | 68 |
| IPR002885 | Pentatricopeptide_repeat | 226 | 272 |
| IPR002885 | Pentatricopeptide_repeat | 123 | 170 |
| No external refs found! |
