Len_g54937


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g54937

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00235510 OTP84,... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AT1G77150 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G33760 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G40410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g003297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116059 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27794 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19051 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11529 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27919 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32466.t1 Aspi01Gene32466 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0012.g012913 No alias not classified & original description: CDS=1-2943 0.03 OrthoFinder output from all 47 species
Azfi_s0024.g020340 No alias not classified & original description: CDS=1-2319 0.04 OrthoFinder output from all 47 species
Azfi_s0065.g035815 No alias not classified & original description: CDS=1-2163 0.03 OrthoFinder output from all 47 species
Azfi_s0125.g048584 CRR22 not classified & original description: CDS=1-1611 0.04 OrthoFinder output from all 47 species
Azfi_s0292.g063377 OTP86 not classified & original description: CDS=1-2337 0.04 OrthoFinder output from all 47 species
Cba_g10670 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g66834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G057100.1 Ceric.32G057100 not classified & original description: pacid=50598475... 0.03 OrthoFinder output from all 47 species
Dac_g03810 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09096 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g14916 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18832 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10089 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g19380.1 LOC_Os01g19380 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os01g60430.1 LOC_Os01g60430 RNA editing factor (MEF10) 0.03 OrthoFinder output from all 47 species
LOC_Os01g62910.1 CRR2, LOC_Os01g62910 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
LOC_Os12g36620.1 LOC_Os12g36620 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Len_g26318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05587 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06599 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07068 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16333 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g36336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03214 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07674 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15699 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g13275 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44325 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g31332 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07486 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g35833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39734 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009761 No alias not classified & original description: CDS=1-2874 0.03 OrthoFinder output from all 47 species
Sam_g03385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo111894 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Smo134463 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Smo76175 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Spa_g08239 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53284 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e010837_P001 LPA66, Zm00001e010837 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Zm00001e029119_P001 Zm00001e029119 Pentatricopeptide repeat-containing protein At2g33760... 0.03 OrthoFinder output from all 47 species
Zm00001e029450_P001 Zm00001e029450 Pentatricopeptide repeat-containing protein At2g46050,... 0.03 OrthoFinder output from all 47 species
Zm00001e030887_P001 Zm00001e030887 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 59 106
IPR002885 Pentatricopeptide_repeat 165 188
IPR002885 Pentatricopeptide_repeat 135 159
No external refs found!