Len_g56529 (OTP84)


Aliases : OTP84

Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g56529

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00084570 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00046850 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Adi_g005487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025748 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036657 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g20047 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g33897 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g01500 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12943 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14569 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24418 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36433 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g37976 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06803 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g62749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62756 VAC1, ECB2, ATECB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g28681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02659 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16832 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g21473 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g70213 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70728 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene02301.t1 Aspi01Gene02301 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02316.t1 Aspi01Gene02316 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02463.t1 Aspi01Gene02463 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02505.t1 Aspi01Gene02505 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02568.t1 Aspi01Gene02568 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02798.t1 Aspi01Gene02798 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03455.t1 Aspi01Gene03455 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05366.t1 VAC1, ECB2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05393.t1 Aspi01Gene05393 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07235.t1 REME1, Aspi01Gene07235 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07941.t1 LPA66, Aspi01Gene07941 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08082.t1 EMB2261, Aspi01Gene08082 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08990.t1 OTP84, Aspi01Gene08990 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10220.t1 OTP84, Aspi01Gene10220 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10264.t1 Aspi01Gene10264 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10387.t1 REME1, Aspi01Gene10387 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13090.t2 Aspi01Gene13090 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14586.t1 Aspi01Gene14586 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14821.t1 CRR2, Aspi01Gene14821 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14860.t1 Aspi01Gene14860 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17383.t1 OTP84, Aspi01Gene17383 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18163.t1 CRR22, Aspi01Gene18163 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24209.t1 VAC1, ECB2,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25991.t1 CRR22, Aspi01Gene25991 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26329.t1 Aspi01Gene26329 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26812.t1 Aspi01Gene26812 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31317.t1 CRR28, Aspi01Gene31317 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31490.t1 Aspi01Gene31490 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34013.t1 Aspi01Gene34013 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34803.t1 Aspi01Gene34803 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34895.t1 Aspi01Gene34895 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37985.t1 DOT4, Aspi01Gene37985 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38545.t1 Aspi01Gene38545 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38554.t1 VAC1, ECB2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40915.t1 CRR22, Aspi01Gene40915 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44213.t1 Aspi01Gene44213 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44451.t1 CRR2, Aspi01Gene44451 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47602.t1 Aspi01Gene47602 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49892.t1 Aspi01Gene49892 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene52031.t2 Aspi01Gene52031 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54043.t1 Aspi01Gene54043 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54997.t1 CRK8, Aspi01Gene54997 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55830.t1 CRR22, Aspi01Gene55830 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55895.t1 Aspi01Gene55895 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56180.t1 EMB2758, Aspi01Gene56180 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61596.t1 CRR2, Aspi01Gene61596 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67320.t1 EMB2758, Aspi01Gene67320 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67653.t1 Aspi01Gene67653 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69580.t1 Aspi01Gene69580 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71401.t1 REME1, Aspi01Gene71401 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72349.t1 EMB2758, Aspi01Gene72349 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000814 CRR22 not classified & original description: CDS=1-2214 0.05 OrthoFinder output from all 47 species
Azfi_s0136.g050953 No alias not classified & original description: CDS=1-2220 0.05 OrthoFinder output from all 47 species
Azfi_s0251.g060294 No alias not classified & original description: CDS=1-879 0.06 OrthoFinder output from all 47 species
Cba_g04727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20030 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g22830 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g25572 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26543 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g35085 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g35519 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45560 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g69088 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g72789 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G008600.1 Ceric.03G008600 not classified & original description: pacid=50571724... 0.04 OrthoFinder output from all 47 species
Ceric.21G004000.1 Ceric.21G004000 not classified & original description: pacid=50604228... 0.05 OrthoFinder output from all 47 species
Dac_g19035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28556 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g35075 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g43258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07738 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g36401 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g50023 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g04434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g40545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_37976 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g30940.1 LOC_Os06g30940 Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
LOC_Os07g10400.1 CRR22, LOC_Os07g10400 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
LOC_Os08g05750.1 LOC_Os08g05750 Pentatricopeptide repeat-containing protein At4g16835,... 0.02 OrthoFinder output from all 47 species
Len_g04783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18855 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g19013 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g20943 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g25473 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g43648 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g59693 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04374 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430171g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_11138g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
MA_9258g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g07585 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g13272 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28474 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g32055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34313 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g36747 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g43551 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47208 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04305 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05901 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10444 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g13680 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21730 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24075 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24651 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25278 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g38538 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g12555 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22808 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g37511 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64875 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g28658 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g31283 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53554 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g55534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56584 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57818 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12540 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g098420.3.1 Solyc03g098420 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc05g046280.3.1 Solyc05g046280 RNA editing factor (MEF13) 0.03 OrthoFinder output from all 47 species
Spa_g45637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05225 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13479 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22636 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g35497 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g41605 OTP81 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44225 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g46024 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 214 237
IPR002885 Pentatricopeptide_repeat 138 184
No external refs found!