Len_g56555 (PGP11)

Aliases : PGP11

Description : subfamily ABCB transporter & original description: none

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g56555

Target	Alias	Description	ECC score	Gene Family Method
Aev_g16830	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g20043	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g20821	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g16048	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g07131	ABCB19,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g33230	ABCB14, ATABCB14, PGP14	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g22201	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g19105	ABCB19,...	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Aop_g29915	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene20594.t1	PGP20, Aspi01Gene20594	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene20595.t1	PGP20, Aspi01Gene20595	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene52651.t1	PGP2, Aspi01Gene52651	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene62053.t1	ABCB19,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene62054.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0010.g012029	ABCB19,...	subfamily ABCB transporter & original description: CDS=121-4035	0.02	OrthoFinder output from all 47 species
Azfi_s2496.g111845	ABCB19,...	subfamily ABCB transporter & original description: CDS=142-3066	0.01	OrthoFinder output from all 47 species
Cba_g12819	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.02G084300.1	ABCB19,...	subfamily ABCB transporter & original description:...	0.02	OrthoFinder output from all 47 species
Dde_g30302	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g21852	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Mp2g11920.1	ABCB19,...	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Msp_g17749	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g34237	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g02494	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g08816	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g37290	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g38163	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g09820	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g07008	ABCB14, ATABCB14, PGP14	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g17867	PGP11	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012919	ABCB19,...	subfamily ABCB transporter & original description: CDS=118-4143	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023107	PGP2	subfamily ABCB transporter & original description: CDS=729-4781	0.01	OrthoFinder output from all 47 species
Solyc03g093650.3.1	Solyc03g093650	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	41	310
IPR003439	ABC_transporter-like_ATP-bd	378	479

External Links

No external refs found!

Len_g56555 (PGP11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation