Description : ER-tubule curvature-inducing protein *(Reticulon) & original description: none
Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Len_g56590 | |
| Cluster | HCCA: Cluster_7 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G68230 | No alias | Reticulon family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G18260 | No alias | Reticulon family protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g25949 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g24666 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g24680 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.19 | OrthoFinder output from all 47 species | |
| Als_g40043 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g42179 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g50102 | BTI1, RTNLB1 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.15 | OrthoFinder output from all 47 species | |
| Aspi01Gene63604.t1 | BTI1, RTNLB1,... | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.19G012300.1 | Ceric.19G012300 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g36852 | BTI1, RTNLB1 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01028796001 | No alias | Reticulon-like protein B5 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| MA_318393g0010 | No alias | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g38145 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g01858 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11395 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.09 | OrthoFinder output from all 47 species | |
| Sam_g37684 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.16 | OrthoFinder output from all 47 species | |
| Solyc03g007740.3.1 | Solyc03g007740 | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g119190.3.1 | Solyc03g119190 | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g20416 | RTNLB3 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g37965 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005880_P001 | Zm00001e005880 | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| BP | GO:0007034 | vacuolar transport | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019207 | kinase regulator activity | IEP | HCCA |
| MF | GO:0019887 | protein kinase regulator activity | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0032392 | DNA geometric change | IEP | HCCA |
| BP | GO:0032508 | DNA duplex unwinding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003388 | Reticulon | 72 | 226 |
| No external refs found! |
