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  5. Len_g57260

Len_g57260 (TINY2)


Aliases : TINY2

Description : subgroup ERF-III transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g57260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00194910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00185480 ERF-1, ATERF-1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00088760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00132820 RAP2.11,... External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
AMTR_s00077p00141890 CRF3,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT2G31230 ATERF15, ERF15 ethylene-responsive element binding factor 15 0.02 OrthoFinder output from all 47 species
AT3G16770 ERF72, EBP, ATEBP, RAP2.3 ethylene-responsive element binding protein 0.02 OrthoFinder output from all 47 species
AT4G25480 DREB1A, ATCBF3, CBF3 dehydration response element B1A 0.02 OrthoFinder output from all 47 species
AT4G31060 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g097717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13916 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g15838 tny subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.06G023400.1 Ceric.06G023400 subgroup ERF-I transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G055400.1 Ceric.10G055400 not classified & original description: pacid=50611842... 0.03 OrthoFinder output from all 47 species
Dac_g15037 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03832 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19848 RAP2.6 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017572001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
GSVIVT01021146001 ERF-1, ATERF-1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01033416001 RAP2.11 External stimuli response.biotic... 0.01 OrthoFinder output from all 47 species
Gb_00125 TINY2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_03782 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_07992 RAP2.9, DEAR5 Ethylene-responsive transcription factor RAP2-9... 0.03 OrthoFinder output from all 47 species
Gb_09495 RAP2.11 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Gb_12583 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_34849 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g43820.1 ERF5, ATERF-5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os02g43940.1 ERF38, ATERF38,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g51670.1 RAP2.4, LOC_Os02g51670 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g55380.1 LOC_Os02g55380 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g09170.1 RAP2.4, LOC_Os03g09170 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g64260.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g34970.1 ERF110, LOC_Os04g34970 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os04g46250.1 ERF-6-6, ERF6,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os08g36920.1 RRTF1, LOC_Os08g36920 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os08g44960.1 ERF14, ATERF14,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os09g11480.2 RAP2.2, LOC_Os09g11480 Ethylene-responsive transcription factor ERF112... 0.02 OrthoFinder output from all 47 species
Lfl_g30898 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
MA_10266433g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_83118g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_9565296g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Msp_g07523 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g11442 No alias subgroup ERF-V transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g13982 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g15422 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g23421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40972 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g04273 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g09341 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g15637 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g18808 DEAR4, RAP2.10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g14872 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Smo68470 ERF-1, ATERF-1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Solyc01g009440.3.1 CBF4, DREB1D,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc01g090370.3.1 ATERF13, ERF13,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc02g067020.1.1 RAP2.11, Solyc02g067020 transcription factor (ERF). transcription factor (ERN1) 0.01 OrthoFinder output from all 47 species
Solyc02g077370.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g118190.4.1 Solyc03g118190 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc04g071770.3.1 ERF110, Solyc04g071770 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc05g051200.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc05g052030.1.1 Solyc05g052030 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc06g063070.3.1 RAP2.12, Solyc06g063070 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc08g078170.1.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc08g078180.1.1 ERF2, ATERF2,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Spa_g13578 ERF110 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Spa_g26845 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e000400_P001 Zm00001e000400 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e000689_P001 Zm00001e000689 transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Zm00001e003579_P001 Zm00001e003579 Ethylene-responsive transcription factor ERF015... 0.02 OrthoFinder output from all 47 species
Zm00001e006604_P001 ERF7, ATERF7,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e023816_P001 Zm00001e023816 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025840_P001 DREB2A, DREB2,... transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Zm00001e030090_P001 DEAR3, Zm00001e030090 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e034242_P001 RAP2.12, Zm00001e034242 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 130 180
No external refs found!