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  5. Len_g58335

Len_g58335 (ATLAC17, LAC17)


Aliases : ATLAC17, LAC17

Description : EC_1.10 oxidoreductase acting on diphenol or related substance as donor & original description: none


Gene families : OG0000044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g58335
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00242000 LAC14,... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.03 OrthoFinder output from all 47 species
AMTR_s00012p00245710 ATLAC17, LAC17,... Cell wall.lignin.monolignol conjugation and... 0.03 OrthoFinder output from all 47 species
Adi_g080241 LAC12 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aspi01Gene12022.t2 ATLAC17, LAC17,... EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dcu_g50138 LAC16 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
GSVIVT01012346001 LAC14 Laccase-14 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01012359001 TT10, LAC15, ATLAC15 Laccase-15 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Len_g24187 LAC3 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
MA_10427033g0010 LAC12 Laccase-12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_208621g0010 LAC3 Laccase-2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_33288g0010 LAC12 Laccase-12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_379710g0010 ATLAC17, LAC17 Laccase-13 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_7231685g0010 LAC12 Putative laccase-17 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Nbi_g10626 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Pp3c4_26051V3.1 LAC1, ATLAC1, Pp3c4_26051 No annotation 0.02 OrthoFinder output from all 47 species
Smo165365 LAC4, IRX12,... Laccase-4 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR001117 Cu-oxidase_2nd 171 321
IPR011707 Cu-oxidase_N 43 156
IPR011706 Cu-oxidase_C 453 517
No external refs found!