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  5. Pir_g00559

Pir_g00559 (DRT111)


Aliases : DRT111

Description : pre-mRNA splicing factor *(SFPS/DRT111) & original description: none


Gene families : OG0007273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g00559

Target Alias Description ECC score Gene Family Method Actions
Adi_g106563 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.02 OrthoFinder output from all 47 species
Ala_g10288 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.04 OrthoFinder output from all 47 species
Cba_g01922 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.02 OrthoFinder output from all 47 species
Len_g09639 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g10863 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.03 OrthoFinder output from all 47 species
Ore_g10943 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 333 394
IPR000467 G_patch_dom 254 293
No external refs found!