Description : deadenylase component *(CCR4) of mRNA deadenylation CCR4-NOT complex & original description: none
Gene families : OG0002208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002208_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s0065.g035974 | No alias | deadenylase component *(CCR4) of mRNA deadenylation... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000342.20 | No alias | RNA processing.RNA decay.deadenylation-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_27365 | No alias | deadenylase component CCR4 of CCR4-NOT complex | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06181 | No alias | deadenylase component *(CCR4) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| MA_58111g0010 | No alias | Carbon catabolite repressor protein 4 homolog 1... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g02392 | No alias | deadenylase component *(CCR4) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g41043 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g39886 | No alias | deadenylase component *(CCR4) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g39887 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g26860 | No alias | deadenylase component *(CCR4) of mRNA deadenylation... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |
