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  5. Pir_g00664

Pir_g00664


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g00664

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00097640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.02 OrthoFinder output from all 47 species
Adi_g097239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g118106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49640 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G015100.1 Ceric.04G015100 not classified & original description: pacid=50632156... 0.03 OrthoFinder output from all 47 species
Dcu_g08906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23526 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013166_P001 Zm00001e013166 Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 198 218
IPR002885 Pentatricopeptide_repeat 836 858
IPR002885 Pentatricopeptide_repeat 126 152
IPR002885 Pentatricopeptide_repeat 736 761
IPR046849 Eplus_motif 946 969
IPR032867 DYW_dom 989 1063
IPR002885 Pentatricopeptide_repeat 325 372
IPR002885 Pentatricopeptide_repeat 660 708
IPR002885 Pentatricopeptide_repeat 527 571
IPR002885 Pentatricopeptide_repeat 225 272
IPR002885 Pentatricopeptide_repeat 762 809
IPR002885 Pentatricopeptide_repeat 427 474
No external refs found!