Aliases : ATVPS54, VPS54
Description : GARP-specific component *(VPS54) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes & original description: none
Gene families : OG0004672 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004672_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00072p00168660 | ATVPS54, VPS54,... | Vesicle trafficking.target membrane tethering.GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G19490 | ATVPS54, VPS54 | VPS54 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g063596 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g02680 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g05127 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.15G033300.1 | ATVPS54, VPS54,... | GARP-specific component *(VPS54) of GARP/EARP... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000241.25 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g12433 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_03763 | ATVPS54, VPS54 | GARP-specific component VPS54 of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g13470.1 | ATVPS54, VPS54,... | GARP-specific component VPS54 of GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g02410 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g09490.1 | ATVPS54, VPS54 | GARP-specific component VPS54 of GARP/EARP... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g16046 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g03262 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g030110.2.1 | ATVPS54, VPS54,... | GARP-specific component VPS54 of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g22745 | ATVPS54, VPS54 | GARP-specific component *(VPS54) of GARP/EARP... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e008702_P001 | ATVPS54, VPS54,... | GARP-specific component VPS54 of GARP/EARP... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e040599_P001 | ATVPS54, VPS54,... | GARP-specific component VPS54 of GARP/EARP... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | HCCA |
| CC | GO:0000145 | exocyst | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | IEP | HCCA |
| MF | GO:0005096 | GTPase activator activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| BP | GO:0006555 | methionine metabolic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0006887 | exocytosis | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007030 | Golgi organization | IEP | HCCA |
| MF | GO:0008047 | enzyme activator activity | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | HCCA |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0019829 | ATPase-coupled monoatomic cation transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | HCCA |
| BP | GO:0032940 | secretion by cell | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| CC | GO:0033179 | proton-transporting V-type ATPase, V0 domain | IEP | HCCA |
| MF | GO:0042625 | ATPase-coupled ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| MF | GO:0043130 | ubiquitin binding | IEP | HCCA |
| MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | HCCA |
| BP | GO:0046903 | secretion | IEP | HCCA |
| MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | HCCA |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| BP | GO:0140352 | export from cell | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR012501 | Vps54_C | 877 | 1008 |
| No external refs found! |
