Pir_g01677


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g01677

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00032470 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.02 OrthoFinder output from all 47 species
AT1G68930 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
AT2G33680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002365 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g002434 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013922 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g019759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033552 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036821 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g042918 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087178 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097074 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117068 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26222 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27561 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33231.t1 CRR22, Aspi01Gene33231 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001409 No alias not classified & original description: CDS=1-2469 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007695 No alias not classified & original description: CDS=1-2262 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010584 No alias not classified & original description: CDS=134-2257 0.04 OrthoFinder output from all 47 species
Azfi_s0009.g011917 No alias not classified & original description: CDS=1-393 0.05 OrthoFinder output from all 47 species
Azfi_s0035.g025724 No alias not classified & original description: CDS=1-3840 0.04 OrthoFinder output from all 47 species
Azfi_s0048.g030454 No alias not classified & original description: CDS=2-2074 0.04 OrthoFinder output from all 47 species
Azfi_s0054.g033714 CRR22 not classified & original description: CDS=1-1803 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037173 No alias not classified & original description: CDS=1-2688 0.03 OrthoFinder output from all 47 species
Azfi_s0094.g043402 No alias not classified & original description: CDS=1-2055 0.04 OrthoFinder output from all 47 species
Azfi_s0098.g043939 EMB2758 not classified & original description: CDS=1-1746 0.05 OrthoFinder output from all 47 species
Azfi_s0104.g044768 EMB2758 not classified & original description: CDS=1-1815 0.03 OrthoFinder output from all 47 species
Azfi_s0229.g059121 CRR22 not classified & original description: CDS=1-2070 0.04 OrthoFinder output from all 47 species
Azfi_s0350.g066567 No alias not classified & original description: CDS=1-2610 0.03 OrthoFinder output from all 47 species
Azfi_s0380.g067373 No alias not classified & original description: CDS=1-3669 0.03 OrthoFinder output from all 47 species
Azfi_s0405.g068373 No alias not classified & original description: CDS=1-2967 0.03 OrthoFinder output from all 47 species
Azfi_s0873.g090702 No alias not classified & original description: CDS=1-2778 0.04 OrthoFinder output from all 47 species
Azfi_s0908.g092256 No alias not classified & original description: CDS=1-621 0.05 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.03 OrthoFinder output from all 47 species
Cba_g02684 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03971 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05966 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07323 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12399 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16282 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g31307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34644 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35120 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35174 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G103400.1 Ceric.04G103400 not classified & original description: pacid=50630509... 0.03 OrthoFinder output from all 47 species
Ceric.06G034400.1 Ceric.06G034400 not classified & original description: pacid=50619664... 0.03 OrthoFinder output from all 47 species
Ceric.10G007000.1 Ceric.10G007000 not classified & original description: pacid=50613077... 0.03 OrthoFinder output from all 47 species
Ceric.13G001600.1 Ceric.13G001600 not classified & original description: pacid=50636694... 0.03 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.04 OrthoFinder output from all 47 species
Ceric.28G018400.1 Ceric.28G018400 not classified & original description: pacid=50571000... 0.03 OrthoFinder output from all 47 species
Ceric.30G025700.1 CRR22, Ceric.30G025700 not classified & original description: pacid=50609433... 0.03 OrthoFinder output from all 47 species
Ceric.33G052800.1 Ceric.33G052800 not classified & original description: pacid=50607149... 0.03 OrthoFinder output from all 47 species
Ceric.38G024200.1 Ceric.38G024200 not classified & original description: pacid=50580039... 0.04 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
Dcu_g08816 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17291 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49227 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_14728 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Gb_31111 EMB2758 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
Gb_32439 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
Gb_38938 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
LOC_Os04g33840.1 LOC_Os04g33840 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os07g39090.1 LOC_Os07g39090 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
LOC_Os12g01850.1 LOC_Os12g01850 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g17760 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25473 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06167 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07668 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12140 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16404 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g19657 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33055 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_119635g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_20585g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_40517g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Msp_g05630 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12146 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31269 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14898 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12221 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57968 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16177 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22860 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23584 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25269 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30610 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30634 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33734 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16080 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008203 OTP86 not classified & original description: CDS=1-2439 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011483 No alias not classified & original description: CDS=1-2124 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018953 No alias not classified & original description: CDS=533-943 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0165.g024096 OTP86 not classified & original description: CDS=1-2154 0.03 OrthoFinder output from all 47 species
Sam_g02656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g02929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo100621 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Smo109721 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.03 OrthoFinder output from all 47 species
Smo75659 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo81625 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Smo99677 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Solyc03g063690.1.1 MEF1, Solyc03g063690 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
Solyc04g051480.1.1 OTP84, Solyc04g051480 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Spa_g05335 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g13906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10679 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16966 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23121 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26545 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31404 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e028330_P001 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 261 284
IPR002885 Pentatricopeptide_repeat 290 319
IPR002885 Pentatricopeptide_repeat 561 588
IPR002885 Pentatricopeptide_repeat 463 487
IPR002885 Pentatricopeptide_repeat 390 420
IPR002885 Pentatricopeptide_repeat 491 520
IPR002885 Pentatricopeptide_repeat 589 618
IPR002885 Pentatricopeptide_repeat 160 185
IPR002885 Pentatricopeptide_repeat 362 383
IPR002885 Pentatricopeptide_repeat 187 233
IPR033443 PPR_long 708 781
No external refs found!