Aliases : ARA-1, ATRABA5E, RABA5E, ATRAB11D, ARA
Description : A-class RAB GTPase & original description: none
Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pir_g02175 | |
| Cluster | HCCA: Cluster_272 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00130p00044920 | ATHSGBP, RABA1d,... | Vesicle trafficking.regulation of membrane tethering and... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g00731 | AtRABA5d, RABA5d | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g04229 | ARA-1, ATRABA5E,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g01480.1 | ATRABA2A,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g41340.1 | AtRABA5d,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
| Len_g16053 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g04633 | RABA2b,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08711 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g09438 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0224.g026297 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: CDS=308-952 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g045550.2.1 | ATRABA2A,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14805 | AtRABA5d, RABA5d | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g27440 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003924 | GTPase activity | IEA | Interproscan |
| MF | GO:0005525 | GTP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004427 | inorganic diphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0004560 | alpha-L-fucosidase activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005801 | cis-Golgi network | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006465 | signal peptide processing | IEP | HCCA |
| MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015928 | fucosidase activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001806 | Small_GTPase | 61 | 221 |
| No external refs found! |
