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  5. Pir_g02188

Pir_g02188 (ATCDSP32, CDSP32)


Aliases : ATCDSP32, CDSP32

Description : plastidial thioredoxin *(TrxL1) & original description: none


Gene families : OG0006806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006806_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g02188
Cluster HCCA: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
Aev_g06490 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11787 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22593 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21447 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.04 OrthoFinder output from all 47 species
MA_99302g0010 ATCDSP32, CDSP32 Thioredoxin-like protein CDSP32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Pp3c3_11890V3.1 Pp3c3_11890 No annotation 0.02 OrthoFinder output from all 47 species
Ppi_g07440 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.04 OrthoFinder output from all 47 species
Smo67262 ATCDSP32, CDSP32 Thioredoxin-like protein CDSP32, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Tin_g10153 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 227 321
IPR013766 Thioredoxin_domain 110 204
No external refs found!