Pir_g02277 (GNC, GATA21)

Aliases : GNC, GATA21

Description : transcription factor *(A/B-GATA) & original description: none

Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g02277

Target	Alias	Description	ECC score	Gene Family Method
Adi_g057963	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g088428	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g14443	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g14739	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g07810	GATA5	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.17G054000.1	GATA5, Ceric.17G054000	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.34G071700.1	GATA5, Ceric.34G071700	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Dde_g21831	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01025199001	BME3-ZF, BME3, GATA8	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
Len_g12686	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g01153	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003575	GATA15	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Smo440037	GNC, GATA21	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
Tin_g10967	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g18035	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0006476	protein deacetylation	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016575	histone deacetylation	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0035601	protein deacylation	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0098732	macromolecule deacylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	307	341

External Links

No external refs found!

Pir_g02277 (GNC, GATA21)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation