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  5. Pir_g02448

Pir_g02448 (TET1, TRN2)


Aliases : TET1, TRN2

Description : not classified & original description: none


Gene families : OG0000199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g02448

Target Alias Description ECC score Gene Family Method Actions
Ala_g01222 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Aob_g01386 TET1, TRN2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g02419 TET8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G090700.1 TET8, Ceric.01G090700 not classified & original description: pacid=50593002... 0.03 OrthoFinder output from all 47 species
Ceric.24G073900.1 TET8, Ceric.24G073900 not classified & original description: pacid=50628789... 0.02 OrthoFinder output from all 47 species
Dac_g42020 TET9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04388 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
LOC_Os08g16050.1 TET8, LOC_Os08g16050 Tetraspanin-7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_19090g0010 TET4 Tetraspanin-3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pnu_g03004 TET1, TRN2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022499 TET2 not classified & original description: CDS=1-792 0.02 OrthoFinder output from all 47 species
Solyc03g114480.4.1 TET8, Solyc03g114480 Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc06g069320.4.1 TET8, Solyc06g069320 Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g10808 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029484_P001 TET6, Zm00001e029484 Tetraspanin-6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e037666_P002 TET8, Zm00001e037666 Tetraspanin-8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 7 246
No external refs found!