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  5. Pir_g02825

Pir_g02825 (SPT)


Aliases : SPT

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g02825

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00241810 CIB1,... External stimuli response.light.UV-A/blue... 0.04 OrthoFinder output from all 47 species
AT1G05805 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.03 OrthoFinder output from all 47 species
AT4G00050 UNE10 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g042065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33578 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10628 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18590 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21216 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05555 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17586 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26245 SPT bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene72623.t1 Aspi01Gene72623 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Cba_g60405 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.27G028300.1 SPT, Ceric.27G028300 bHLH-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.34G041700.1 PIF3, POC1,... bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g20328 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18718 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007914001 PIF7 RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
GSVIVT01018164001 UNE10 Transcription factor UNE10 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01025313001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01026056001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01033356001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
LOC_Os08g39630.1 LOC_Os08g39630 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Len_g24250 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13241 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42257 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Nbi_g01167 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47068 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05994 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52771 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g090790.4.1 UNE10, Solyc01g090790 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g06721 SPT bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g21312 SPT bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g13566 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27626 SPT bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g38881 SPT bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e002331_P003 UNE10, Zm00001e002331 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e005046_P003 PIL5, PIF1,... transcription factor (bHLH). PIF red/far-red light... 0.02 OrthoFinder output from all 47 species
Zm00001e005554_P001 Zm00001e005554 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e012110_P003 Zm00001e012110 transcription factor (bHLH). transcriptional regulator (CIB) 0.01 OrthoFinder output from all 47 species
Zm00001e035219_P001 Zm00001e035219 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e037598_P001 Zm00001e037598 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 376 422
No external refs found!