Pir_g03061


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g03061

Target Alias Description ECC score Gene Family Method Actions
AT1G77150 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g035521 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036845 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087178 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38690 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g49640 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13294 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30723 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00868 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05758 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07147 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07456 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18769 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20750 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30788 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54931 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55221 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55222 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04252 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05069 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18136 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g42334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g61630 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007744 No alias not classified & original description: CDS=1-3075 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009069 CRR22 not classified & original description: CDS=1-1992 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025724 No alias not classified & original description: CDS=1-3840 0.03 OrthoFinder output from all 47 species
Azfi_s0093.g043298 OSB3 ssDNA-binding protein *(OSB) & original description: CDS=1-1062 0.03 OrthoFinder output from all 47 species
Azfi_s0350.g066567 No alias not classified & original description: CDS=1-2610 0.03 OrthoFinder output from all 47 species
Azfi_s0506.g073971 No alias not classified & original description: CDS=1-2430 0.03 OrthoFinder output from all 47 species
Azfi_s0658.g081287 CRR22 not classified & original description: CDS=1-1986 0.03 OrthoFinder output from all 47 species
Cba_g03341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04703 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18562 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g18809 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34639 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g67802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.03 OrthoFinder output from all 47 species
Ceric.10G077700.1 Ceric.10G077700 not classified & original description: pacid=50611965... 0.05 OrthoFinder output from all 47 species
Ceric.29G060200.1 Ceric.29G060200 not classified & original description: pacid=50624987... 0.03 OrthoFinder output from all 47 species
Ceric.34G063100.1 Ceric.34G063100 not classified & original description: pacid=50623551... 0.03 OrthoFinder output from all 47 species
Dac_g00755 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g03359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20347 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22020 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25030 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06446 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16658 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g19078 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26858 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35895 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g35980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40950 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40966 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42218 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g42474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45948 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g01393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04862 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10164206g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_18165g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
MA_31170g0010 CRR22 RNA editing factor (MEF19) 0.02 OrthoFinder output from all 47 species
MA_34492g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Msp_g06015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14080 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19376 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g21545 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41366 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45777 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g04945 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04969 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06220 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06654 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15839 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22679 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04075 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12907 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40943 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04238 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04638 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05345 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30840 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23118 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24942 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 450 497
IPR002885 Pentatricopeptide_repeat 348 395
IPR002885 Pentatricopeptide_repeat 246 293
IPR002885 Pentatricopeptide_repeat 144 191
No external refs found!