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  5. Pir_g03103

Pir_g03103


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g03103

Target Alias Description ECC score Gene Family Method Actions
AT5G59200 OTP80 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g099021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g112586 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09035 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g32922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g029919 No alias not classified & original description: CDS=1-2448 0.02 OrthoFinder output from all 47 species
Cba_g02644 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G031800.1 Ceric.03G031800 not classified & original description: pacid=50573080... 0.03 OrthoFinder output from all 47 species
Ceric.24G028500.1 Ceric.24G028500 not classified & original description: pacid=50629587... 0.03 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16948 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38585 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g49830.1 LOC_Os02g49830 Pentatricopeptide repeat-containing protein At3g22690... 0.02 OrthoFinder output from all 47 species
LOC_Os04g09530.1 LOC_Os04g09530 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
Lfl_g15164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32911 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Msp_g03474 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07924 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27707 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27836 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32180 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04708 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30624 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31968 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019295 No alias not classified & original description: CDS=1-1539 0.03 OrthoFinder output from all 47 species
Sam_g01624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g005690.3.1 Solyc06g005690 Pentatricopeptide repeat-containing protein At5g59600... 0.02 OrthoFinder output from all 47 species
Spa_g17205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
CC GO:0031082 BLOC complex IEP HCCA
CC GO:0031083 BLOC-1 complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 806 831
IPR002885 Pentatricopeptide_repeat 502 524
IPR002885 Pentatricopeptide_repeat 94 117
IPR002885 Pentatricopeptide_repeat 398 422
IPR002885 Pentatricopeptide_repeat 119 166
IPR002885 Pentatricopeptide_repeat 222 268
IPR002885 Pentatricopeptide_repeat 426 472
IPR002885 Pentatricopeptide_repeat 530 574
IPR002885 Pentatricopeptide_repeat 731 778
IPR002885 Pentatricopeptide_repeat 324 370
IPR002885 Pentatricopeptide_repeat 629 676
No external refs found!