Pir_g04878 (RIK)


Aliases : RIK

Description : not classified & original description: none


Gene families : OG0003712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003712_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g04878

Target Alias Description ECC score Gene Family Method Actions
Als_g23032 RIK not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g32926 RIK not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g49526 RIK not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0042.g026901 RIK not classified & original description: CDS=185-2083 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.38 No alias Protein RIK OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g48860 RIK not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g13113 RIK not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05577 RIK Protein RIK OS=Zea mays (sp|q32sg5|rik_maize : 297.0) 0.03 OrthoFinder output from all 47 species
Lfl_g09097 RIK not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp7g05440.1 RIK Protein RIK OS=Zea mays (sp|q32sg5|rik_maize : 204.0) 0.02 OrthoFinder output from all 47 species
Ppi_g31880 RIK not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20684 RIK not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!