Pir_g05568


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g05568

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00263110 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.02 OrthoFinder output from all 47 species
AMTR_s00011p00233950 No alias Pentatricopeptide repeat-containing protein At4g37170... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00210350 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00062p00213230 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
AMTR_s00155p00018120 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
AT3G25970 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G49170 EMB2261 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G33170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G39680 EMB2744 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003786 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003802 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g009247 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014913 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015939 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035612 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g066608 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g089076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g094457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101228 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102645 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03223 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28002 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06729 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g41404 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42153 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13090.t2 Aspi01Gene13090 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016118 OTP84 not classified & original description: CDS=1-2007 0.03 OrthoFinder output from all 47 species
Azfi_s0257.g060572 No alias not classified & original description: CDS=1-2448 0.04 OrthoFinder output from all 47 species
Cba_g05301 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07727 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34546 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g42618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g04509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43217 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07752 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08508 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50253 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06035 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000072001 No alias Pentatricopeptide repeat-containing protein At3g05340... 0.02 OrthoFinder output from all 47 species
GSVIVT01003453001 OTP80 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01007811001 No alias Pentatricopeptide repeat-containing protein At3g22690... 0.02 OrthoFinder output from all 47 species
GSVIVT01010654001 No alias Pentatricopeptide repeat-containing protein At4g38010... 0.02 OrthoFinder output from all 47 species
GSVIVT01015521001 No alias Pentatricopeptide repeat-containing protein At4g32430,... 0.02 OrthoFinder output from all 47 species
GSVIVT01017075001 OTP82 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
GSVIVT01024915001 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species
GSVIVT01028697001 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.02 OrthoFinder output from all 47 species
GSVIVT01033837001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
GSVIVT01035837001 LPA66 Pentatricopeptide repeat-containing protein At4g21065... 0.02 OrthoFinder output from all 47 species
GSVIVT01038381001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Gb_19040 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Len_g25603 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03987 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09949 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12137 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_38395g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_53781g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_863836g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
MA_9354530g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Msp_g06422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22512 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16027 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32582 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12874 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g04533 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56584 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007750 No alias not classified & original description: CDS=1-1920 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015229 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-1704 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018685 No alias not classified & original description: CDS=1-1332 0.04 OrthoFinder output from all 47 species
Sam_g09072 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11848 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g091610.1.1 Solyc01g091610 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Solyc02g065410.3.1 CRR22, Solyc02g065410 Pentatricopeptide repeat-containing protein At1g20230... 0.02 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.02 OrthoFinder output from all 47 species
Solyc09g010070.1.1 EMB2758, Solyc09g010070 Pentatricopeptide repeat-containing protein At4g33990... 0.02 OrthoFinder output from all 47 species
Spa_g01551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g11708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12641 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16047 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26703 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g27467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45696 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56842 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02869 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06620 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09309 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13476 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19943 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32428 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44704 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45439 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007600_P001 Zm00001e007600 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e018565_P001 Zm00001e018565 Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
Zm00001e032581_P001 Zm00001e032581 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 206 234
IPR002885 Pentatricopeptide_repeat 481 501
IPR002885 Pentatricopeptide_repeat 279 301
IPR002885 Pentatricopeptide_repeat 610 640
IPR002885 Pentatricopeptide_repeat 711 741
IPR002885 Pentatricopeptide_repeat 582 608
IPR002885 Pentatricopeptide_repeat 408 452
IPR002885 Pentatricopeptide_repeat 304 351
IPR032867 DYW_dom 946 1022
IPR002885 Pentatricopeptide_repeat 507 555
IPR046849 Eplus_motif 893 916
No external refs found!