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  5. Pir_g06393

Pir_g06393 (GATA6)


Aliases : GATA6

Description : transcription factor *(A/B-GATA) & original description: none


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g06393
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00242860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00112210 GATA1,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AT2G18380 GATA20 GATA transcription factor 20 0.03 OrthoFinder output from all 47 species
AT3G24050 GATA1 GATA transcription factor 1 0.02 OrthoFinder output from all 47 species
AT3G60530 GATA4 GATA transcription factor 4 0.03 OrthoFinder output from all 47 species
Adi_g016252 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021303 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036776 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058312 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082687 GATA5 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g116352 GATA12 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g01113 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07273 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20978 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g43029 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52135 GATA5 transcription factor *(A/B-GATA) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g10970 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07249.t1 GATA9, Aspi01Gene07249 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12734.t1 GATA5, Aspi01Gene12734 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60517.t1 GATA20, Aspi01Gene60517 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67105.t1 GATA5, Aspi01Gene67105 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1514.g103937 GATA20 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g04557 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05826 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38063 GATA5 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G070700.1 GATA20, Ceric.04G070700 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G054000.1 GATA5, Ceric.17G054000 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.25G025900.1 GATA9, Ceric.25G025900 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.27G027400.1 GATA12, Ceric.27G027400 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Cre08.g358534 GATA1 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Dac_g11064 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03786 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07436 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11115 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19706 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21727 GATA1 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g22706 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26522 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26819 GATA9 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26857 GATA12 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27336 GATA1 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015204001 GNC, GATA21 RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
GSVIVT01018951001 HAN, MNP, GATA18 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
GSVIVT01024194001 GATA5 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Gb_24250 GATA9 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Gb_25568 GATA20 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os01g24070.1 GATA23, LOC_Os01g24070 transcription factor (GATA) 0.01 OrthoFinder output from all 47 species
LOC_Os01g54210.1 GATA12, LOC_Os01g54210 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
LOC_Os02g56250.1 BME3-ZF, BME3,... transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
LOC_Os03g05160.1 BME3-ZF, BME3,... transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os05g50270.1 GATA19, LOC_Os05g50270 transcription factor (GATA) 0.05 OrthoFinder output from all 47 species
LOC_Os06g37450.1 GATA22, CGA1,... transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os09g08150.1 LOC_Os09g08150 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g07120.1 GATA14, LOC_Os12g07120 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
LOC_Os12g42970.1 GATA4, LOC_Os12g42970 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species
Lfl_g03183 GATA4 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
MA_103421g0030 GATA5 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
MA_82238g0030 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_92522g0010 GATA20 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Nbi_g10197 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34157 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27417 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09627 GATA9 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17490 GATA12 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06282 GATA5 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000079 GATA9 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011193 GATA2 transcription factor *(A/B-GATA) & original description:... 0.03 OrthoFinder output from all 47 species
Smo69510 GATA23 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
Solyc02g062760.4.1 HAN, MNP,... transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Solyc03g033660.4.1 GATA5, Solyc03g033660 transcription factor (GATA) 0.07 OrthoFinder output from all 47 species
Solyc05g053500.4.1 GATA1, Solyc05g053500 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Spa_g15861 GATA12 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16103 GATA9 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14454 GATA5 transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015260_P001 GATA5, Zm00001e015260 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e026560_P001 GATA20, Zm00001e026560 transcription factor (GATA) 0.01 OrthoFinder output from all 47 species
Zm00001e026601_P001 GATA20, Zm00001e026601 transcription factor (GATA) 0.04 OrthoFinder output from all 47 species
Zm00001e032219_P001 GATA12, Zm00001e032219 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e032513_P001 Zm00001e032513 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e039468_P001 Zm00001e039468 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e039469_P001 GATA12, Zm00001e039469 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 257 290
No external refs found!