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  5. Pir_g06488

Pir_g06488 (CIB1)


Aliases : CIB1

Description : regulatory protein (CIB) of blue light perception & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g06488

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00184910 LRL1,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00079p00137860 BEE3,... External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
AT1G25330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G29950 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.03 OrthoFinder output from all 47 species
AT4G28790 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G61270 PIF7 phytochrome-interacting factor7 0.02 OrthoFinder output from all 47 species
Adi_g042065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075291 ATRSL1, RSL1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23312 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07904 CIB1 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Als_g48384 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21701 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aop_g41589 RSL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01205.t1 CIB1, Aspi01Gene01205 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03952.t1 Aspi01Gene03952 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene35709.t2 Aspi01Gene35709 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44356.t1 RSL2, Aspi01Gene44356 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67543.t1 SPT, Aspi01Gene67543 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0319.g064443 RSL2 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0482.g073137 LRL3 bHLH-type transcription factor & original description: CDS=1-1173 0.03 OrthoFinder output from all 47 species
Cba_g57539 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G045500.1 Ceric.04G045500 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.08G020500.1 RSL2, Ceric.08G020500 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z051300.1 LRL3, Ceric.1Z051300 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G068300.1 Ceric.32G068300 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Dac_g08187 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Dac_g09242 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21654 HEC1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07694 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28520 ALC bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009479001 HEC1 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
GSVIVT01013553001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01018164001 UNE10 Transcription factor UNE10 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01018165001 UNE10 RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01020814001 SRL2, PIF4, AtPIF4 External stimuli response.light.red/far red light.PIF... 0.03 OrthoFinder output from all 47 species
GSVIVT01025313001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01026056001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01028238001 PIF3, POC1, PAP3 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Gb_07156 PIF3, POC1, PAP3 transcription factor (bHLH). PIF red/far-red light... 0.03 OrthoFinder output from all 47 species
Gb_20300 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Gb_36369 BPEp, ZCW32, BPE, BPEub transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g67480.1 LOC_Os01g67480 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os05g46370.1 LOC_Os05g46370 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os06g08500.1 LRL3, LOC_Os06g08500 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os06g30090.1 RHD6, LOC_Os06g30090 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Lfl_g12392 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g37660 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g38961 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
MA_96671g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Mp3g23300.1 HEC3 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Mp6g21470.1 RSL2 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Nbi_g15688 HEC1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08799 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19414 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19998 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26644 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28386 No alias transcriptional co-activator *(FBH) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38111 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Pir_g47068 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50236 PIL5, PIF1 regulatory protein *(PIF) of red/far-red light... 0.03 OrthoFinder output from all 47 species
Ppi_g32176 RSL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36377 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo39143 ALC RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Solyc03g034000.3.1 BEE2, Solyc03g034000 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc03g113560.4.1 Solyc03g113560 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc03g119390.4.1 BEE3, Solyc03g119390 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Solyc04g005130.3.1 Solyc04g005130 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Solyc04g007300.4.1 BEE3, Solyc04g007300 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Solyc05g006650.3.1 Solyc05g006650 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc07g043580.4.1 PIL6, PIF5,... transcription factor (bHLH). PIF red/far-red light... 0.04 OrthoFinder output from all 47 species
Solyc11g005780.3.1 HEC3, Solyc11g005780 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc12g010170.2.1 LRL1, Solyc12g010170 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g22560 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45190 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002331_P003 UNE10, Zm00001e002331 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e009823_P002 LRL1, Zm00001e009823 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e010540_P001 Zm00001e010540 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e011084_P002 Zm00001e011084 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e011866_P002 UNE12, Zm00001e011866 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e029147_P001 HEC3, Zm00001e029147 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e030725_P001 Zm00001e030725 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e032280_P001 Zm00001e032280 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e032950_P002 UNE12, Zm00001e032950 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e035422_P001 RSL4, Zm00001e035422 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e037266_P001 Zm00001e037266 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e041668_P001 PIL5, PIF1,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 230 277
No external refs found!