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  5. Pir_g07061

Pir_g07061 (ATRBP31, CP31, ATRBP33, RBP31)


Aliases : ATRBP31, CP31, ATRBP33, RBP31

Description : not classified & original description: none


Gene families : OG0000715 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000715_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g07061
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT3G53460 CP29 chloroplast RNA-binding protein 29 0.03 OrthoFinder output from all 47 species
AT5G50250 CP31B chloroplast RNA-binding protein 31B 0.04 OrthoFinder output from all 47 species
Als_g08489 CP31B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10701 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05873 ATRBP31, CP31,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G096500.1 ATRBP31, CP31,... not classified & original description: pacid=50595915... 0.03 OrthoFinder output from all 47 species
Ceric.20G084200.1 ATRBP31, CP31,... not classified & original description: pacid=50566499... 0.04 OrthoFinder output from all 47 species
Dde_g00421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05227 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01025697001 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris 0.04 OrthoFinder output from all 47 species
LOC_Os03g25960.1 LOC_Os03g25960 RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os08g44290.1 ATRBP31, CP31,... RNA editing factor (CP31) 0.02 OrthoFinder output from all 47 species
Lfl_g01140 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03865 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434075g0010 CP31B component psPSRP2 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Mp2g13800.1 No alias 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.01 OrthoFinder output from all 47 species
Mp8g03420.1 No alias 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Msp_g06420 ATRBP31, CP31,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02798 ATRBP31, CP31,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g03561 CP31B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021464 CP31B not classified & original description: CDS=19-840 0.04 OrthoFinder output from all 47 species
Solyc01g006940.4.1 PDE322, CP33,... 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Solyc08g076840.3.1 Solyc08g076840 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Solyc09g007850.3.1 Solyc09g007850 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Solyc10g086150.2.1 Solyc10g086150 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Spa_g07686 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001824_P002 Zm00001e001824 RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e003947_P001 ATRBP31, CP31,... RNA editing factor (CP31) 0.02 OrthoFinder output from all 47 species
Zm00001e032835_P001 PDE322, CP33,... RNA-binding protein CP33, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e033465_P001 ATRBP31, CP31,... RNA editing factor (CP31) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 110 180
IPR000504 RRM_dom 207 277
No external refs found!