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  5. Pir_g08857

Pir_g08857


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g08857
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
AT5G59200 OTP80 Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g014779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034178 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32984 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g11518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16565 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g19430 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36200 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g19182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24083 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g28235 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008648 No alias not classified & original description: CDS=1-2118 0.02 OrthoFinder output from all 47 species
Cba_g06220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20760 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g31684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.36G058400.1 Ceric.36G058400 not classified & original description: pacid=50568396... 0.01 OrthoFinder output from all 47 species
Dac_g05769 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g28729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33196 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35670 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g43218 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07748 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08229 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17218 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22855 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g22321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09279 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g26581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10630 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28174 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32911 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27923 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31404 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g06205 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24053 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g31921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16060 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g38571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13363 MEF22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16520 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57343 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17174 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19760 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo115259 CRR2 Pentatricopeptide repeat-containing protein At3g24000,... 0.01 OrthoFinder output from all 47 species
Smo34638 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.02 OrthoFinder output from all 47 species
Spa_g20187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29657 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g55575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11102 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12719 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23272 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR046848 E_motif 778 838
IPR002885 Pentatricopeptide_repeat 420 452
IPR002885 Pentatricopeptide_repeat 170 205
IPR002885 Pentatricopeptide_repeat 258 305
IPR002885 Pentatricopeptide_repeat 455 502
IPR002885 Pentatricopeptide_repeat 558 605
IPR002885 Pentatricopeptide_repeat 660 705
IPR002885 Pentatricopeptide_repeat 333 359
IPR002885 Pentatricopeptide_repeat 633 658
IPR002885 Pentatricopeptide_repeat 532 557
IPR002885 Pentatricopeptide_repeat 734 758
No external refs found!