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  5. Pir_g08931

Pir_g08931


Description : LRR-domain extensin & original description: none


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g08931

Target Alias Description ECC score Gene Family Method Actions
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.04 OrthoFinder output from all 47 species
AT2G15880 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G06744 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.02 OrthoFinder output from all 47 species
Aev_g43377 LRX2 component *(FES1) of FRI-C transcription effector... 0.03 OrthoFinder output from all 47 species
Als_g03771 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18015 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03151 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04597 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G055900.1 Ceric.17G055900 LRR-domain extensin & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g32918 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36028 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018025001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os05g09640.1 LOC_Os05g09640 Leucine-rich repeat extensin-like protein 4... 0.04 OrthoFinder output from all 47 species
Lfl_g17909 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23899 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30505 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31622 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.03 OrthoFinder output from all 47 species
Zm00001e031241_P001 Zm00001e031241 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Zm00001e041184_P001 Zm00001e041184 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 79 113
IPR001611 Leu-rich_rpt 296 354
No external refs found!