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  5. Pir_g09671

Pir_g09671


Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g09671

Target Alias Description ECC score Gene Family Method Actions
AT5G01980 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g107117 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g05960 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g13383 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g62505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G020900.1 Ceric.06G020900 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g02398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19575 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g30265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_816375g0010 RHC1A Probable E3 ubiquitin-protein ligase RHC1A... 0.01 OrthoFinder output from all 47 species
Mp7g15970.1 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g10633 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15631 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011411 No alias not classified & original description: CDS=1-1419 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011589 No alias not classified & original description: CDS=1-987 0.02 OrthoFinder output from all 47 species
Spa_g55156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039308_P001 Zm00001e039308 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 232 275
IPR039525 RNF126-like_zinc-ribbon 5 36
No external refs found!