Pir_g10336 (CPN60B, LEN1)

Aliases : CPN60B, LEN1

Description : chaperone *(Hsp60) & original description: none

Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g10336

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00260480	evm_27.TU.AmTr_v1...	External stimuli response.temperature.Hsp...	0.04	OrthoFinder output from all 47 species
AMTR_s00106p00119930	CPN60B, LEN1,...	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Adi_g058751	CH-CPN60A, CPN60A, SLP	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g09354	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g02236	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.05	OrthoFinder output from all 47 species
Als_g26318	No alias	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g31738	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g03270	No alias	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g03962	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g13701	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001107.20	CH-CPN60A, CPN60A, SLP	RuBisCO large subunit-binding protein subunit alpha,...	0.01	OrthoFinder output from all 47 species
Dcu_g03921	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g03882	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01010149001	No alias	External stimuli response.temperature.Hsp...	0.04	OrthoFinder output from all 47 species
Len_g23409	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g59695	CPN60B, LEN1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g14667	CH-CPN60A, CPN60A, SLP	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g32241	No alias	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g40159	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g56884	CPN60B, LEN1	chaperone *(Hsp60) & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g15739	No alias	chaperone *(Hsp60) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc05g010240.4.1	Solyc05g010240	subunit beta of Cpn60 chaperonin complex. component...	0.04	OrthoFinder output from all 47 species
Zm00001e001025_P002	Zm00001e001025	subunit beta of Cpn60 chaperonin complex. component...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	91	594

External Links

No external refs found!

Pir_g10336 (CPN60B, LEN1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation