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  5. Pir_g11204

Pir_g11204


Description : not classified & original description: none


Gene families : OG0000423 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000423_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g11204

Target Alias Description ECC score Gene Family Method Actions
Als_g12711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007556 No alias not classified & original description: CDS=1-1002 0.03 OrthoFinder output from all 47 species
Azfi_s0193.g057132 No alias not classified & original description: CDS=1-975 0.03 OrthoFinder output from all 47 species
Dac_g00700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017961001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_20062 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g68140.1 LOC_Os01g68140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g00952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12645 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g13797 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g15866 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_100150g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_16371g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_79411g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g06461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g121220.2.1 Solyc03g121220 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g02207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18036 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008586 DUF868_pln 2 286
No external refs found!