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  5. Pir_g11311

Pir_g11311 (NCED3, SIS7, STO1, ATNCED3)


Aliases : NCED3, SIS7, STO1, ATNCED3

Description : EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase) & original description: none


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g11311
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00256600 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G30100 ATNCED5, NCED5 nine-cis-epoxycarotenoid dioxygenase 5 0.02 OrthoFinder output from all 47 species
AT4G18350 NCED2, ATNCED2 nine-cis-epoxycarotenoid dioxygenase 2 0.02 OrthoFinder output from all 47 species
Aspi01Gene08012.t1 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Aspi01Gene10157.t1 CCD4, NCED4,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Aspi01Gene19977.t1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Aspi01Gene29851.t1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Aspi01Gene54184.t1 ATCCD1, CCD1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0010.g012346 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ceric.01G078800.1 ATNCED9, NCED9,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Ceric.23G048100.1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Ceric.35G030200.1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Dac_g12313 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Dac_g39217 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ehy_g19766 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ehy_g26538 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Gb_07367 NCED3, SIS7,... carotenoid cleavage dioxygenase (CCD4). neoxanthin... 0.03 OrthoFinder output from all 47 species
LOC_Os02g47510.1 CCD4, NCED4,... carotenoid cleavage dioxygenase (CCD4) 0.02 OrthoFinder output from all 47 species
Lfl_g21057 CCD4, NCED4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428505g0020 NCED3, SIS7,... neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species
MA_169439g0010 ATNCED5, NCED5 9-cis-epoxycarotenoid dioxygenase NCED4, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_90573g0010 CCD4, NCED4 carotenoid cleavage dioxygenase (CCD4) 0.03 OrthoFinder output from all 47 species
Nbi_g14297 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Pir_g14052 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ppi_g32214 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ppi_g43883 CCD4, NCED4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003802 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Smo165469 ATCCD1, CCD1,... Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
Spa_g04370 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Spa_g15240 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Tin_g13052 NCED3, SIS7,... EC_1.13 oxidoreductase acTing on single donor with... 0.03 OrthoFinder output from all 47 species
Tin_g15213 NCED3, SIS7,... EC_1.13 oxidoreductase acTing on single donor with... 0.02 OrthoFinder output from all 47 species
Zm00001e005009_P001 NCED3, SIS7,... neoxanthin cleavage protein 0.02 OrthoFinder output from all 47 species
Zm00001e012402_P001 NCED3, SIS7,... neoxanthin cleavage protein 0.01 OrthoFinder output from all 47 species
Zm00001e032833_P001 ATNCED9, NCED9,... neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 151 627
No external refs found!