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  5. Pir_g11548

Pir_g11548


Description : component *(uL10c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0005040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g11548

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00218670 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT5G13510 No alias Ribosomal protein L10 family protein 0.04 OrthoFinder output from all 47 species
Ala_g04789 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Als_g52226 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Aob_g00810 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aop_g05054 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aspi01Gene09795.t1 Aspi01Gene09795 component *(uL10c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.20G078900.1 Ceric.20G078900 component *(uL10c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020516.18 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Cre06.g272850 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dac_g03164 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Dcu_g03520 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ehy_g00714 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Gb_21730 No alias component mtRPL10|psRPL10 of large ribosomal subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os03g17580.1 LOC_Os03g17580 component mtRPL10|psRPL10 of large ribosomal subunit... 0.04 OrthoFinder output from all 47 species
Len_g13372 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g00434 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
MA_483364g0010 No alias component mtRPL10|psRPL10 of large ribosomal subunit... 0.04 OrthoFinder output from all 47 species
Mp4g07300.1 No alias component mtRPL10|psRPL10 of large ribosomal subunit... 0.03 OrthoFinder output from all 47 species
Nbi_g00675 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ore_g19831 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ore_g30194 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ore_g32458 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c1_1330V3.1 Pp3c1_1330 Ribosomal protein L10 family protein 0.01 OrthoFinder output from all 47 species
Ppi_g54796 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008577 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Smo233811 No alias Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Spa_g24954 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Tin_g00512 No alias component *(uL10c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Zm00001e001284_P001 Zm00001e001284 component mtRPL10|psRPL10 of large ribosomal subunit... 0.07 OrthoFinder output from all 47 species
Zm00001e038440_P001 Zm00001e038440 component mtRPL10|psRPL10 of large ribosomal subunit... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001790 Ribosomal_L10P 58 141
No external refs found!