Pir_g11659


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g11659

Target Alias Description ECC score Gene Family Method Actions
AT2G38300 No alias myb-like HTH transcriptional regulator family protein 0.03 OrthoFinder output from all 47 species
Adi_g025472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08301 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20512 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06547 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g13279 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g32108 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g32729 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g01625 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g37355 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g43219 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G023400.1 Ceric.02G023400 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G021000.1 KAN, KAN1,... KANADI-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.28G068700.1 Ceric.28G068700 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g04642 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31337 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01005342001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os02g07770.1 APL, WDY, LOC_Os02g07770 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g14490.1 LOC_Os02g14490 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
LOC_Os06g35140.1 LOC_Os06g35140 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os08g33750.1 LOC_Os08g33750 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g23200.1 KAN, KAN1, LOC_Os09g23200 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Len_g00522 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Len_g15893 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Mp4g01560.1 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Mp4g07330.1 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Msp_g37137 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g17399 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19105 KAN, KAN1 KANADI-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g19106 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43178 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g21082 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g41633 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017585 No alias not classified & original description: CDS=1499-2212 0.02 OrthoFinder output from all 47 species
Solyc09g005370.1.1 Solyc09g005370 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g39146 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g12896 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004125_P001 Zm00001e004125 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e013758_P003 APL, WDY, Zm00001e013758 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e035893_P001 Zm00001e035893 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e037731_P001 APL, WDY, Zm00001e037731 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e039024_P001 Zm00001e039024 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 140 187
IPR001005 SANT/Myb 46 96
No external refs found!